Package de.julielab.jules.ae.genemapping.resources

Class ContextIndexGenerator

java.lang.Object

de.julielab.jules.ae.genemapping.resources.ContextIndexGenerator

public class ContextIndexGenerator
extends java.lang.Object

Constructor Summary

Constructors

Constructor	Description
ContextIndexGenerator(java.io.File biothesaurusFile, java.io.File indexFile, java.lang.String resourcesDir)	constructor which creates index in the specified directory on the disk

Method Summary

Modifier and Type	Method	Description
void	createIndex(java.lang.String idType)	create the index, i.e.
static void	main(java.lang.String[] args)	To execute the ContextIndexGenerator start it with the following command-line arguments: arg0: path to resources directory arg1: path to context indices directory

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ContextIndexGenerator

public ContextIndexGenerator(java.io.File biothesaurusFile,
                             java.io.File indexFile,
                             java.lang.String resourcesDir)
                      throws java.io.FileNotFoundException,
                             java.io.IOException

constructor which creates index in the specified directory on the disk

Throws:

java.io.FileNotFoundException

java.io.IOException

Method Detail

main

public static void main(java.lang.String[] args)

To execute the ContextIndexGenerator start it with the following command-line arguments:
arg0: path to resources directory arg1: path to context indices directory

Parameters:

args -

createIndex

public void createIndex(java.lang.String idType)
                 throws java.io.IOException

create the index, i.e. read from the biothesaurus file (which is expected to have normalized synonyms!) and then write it to the index.

Throws:

java.io.IOException